Survival view in analysis tab

From Array Suite Wiki

Jump to: navigation, search

Contents

Overview

It is possible to get survival view for the sample set with survival days and survival event meta data in analysis / project tab and here is an example.

Step1

Right click on the omicdata object and select add view, and choose add survival view. Click OK and specify time column, event column and specify event.

Addview.jpg

Choose time event specifyevent.jpeg

Step2

If you have sample with missing information in survival[days] column or survival[event] column its going to throw an error saying that Missing/negative data found. Make sure you filter out the samples with any missing metadata by setting up the filters under observation tab.


Filter samples with missing column information.jpg

Step3

Once you set the filters this will generate a survival plot.

Survival view.jpeg

Related Articles

[back to top]