ReportGeneTranscriptCounts

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Begin ReportGeneTranscriptCounts /Namespace=NgsLib;
Project ProjectName;
Data ProjectName\\DatasetName;
GeneModel Ensembl.R65;
Options /ExpressionMeasurement=RPKM_Gene+Transcript/ Add1=False /CountFragments=True 
/ExcludeMultiReads=False /Tpm=False /Rpm=False /ParallelJobNumber=1 /UseEffectiveTranscriptLength=False 
/CountStrandedReads=True /CountReverseStrandedReads=True;
Output ;
End;

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Report Gene Transcript Counts GUI

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