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--- CustomCommand......07/09/2019
--- Change Array Studio Omicsoft directory......04/10/2019
--- EnableAWSSpot......04/01/2019
--- Stack ovf guard base not met......01/02/2019
--- Unable to install arraystudio due to security settings......12/12/2018
--- Array Studio IT Requirements......08/03/2018
--- Application validation did not succeed......07/18/2018
--- Hardware/software requirements for LandExplorer......06/28/2018
--- Mageck Pscript demo.pdf......04/25/2018
--- User Group Meeting 2017......03/20/2018
--- Land Delivery error message: Cannot handle address family......02/21/2018
--- Benchmark ArrayStudio to RStudio.pdf......02/19/2018
--- Ngs SentieonTNSeqPipeline.pdf......02/09/2018
--- OncoLand Case Study - OncoGEO......11/01/2017
--- OncoLand Case Study - Differential Expression within and between Tumor Types......10/13/2017
--- Create a searchable shortcut to OmicSoft wiki......10/03/2017
--- Export powerpoint size is too small......09/28/2017
--- Export Consensus Sequence......09/26/2017
--- Omicsoft GenCode Gene ModelV27......09/12/2017
--- Error: Timeout exceeded while waiting for welcome message......09/11/2017
--- How genes are prioritized in mutation annotation......06/08/2017
--- Error Can not connect to Omicsoft server for license checking and online streaming......03/29/2017
--- Genome Browser Use Case: Access genome browser session via hyperlinks in an excel file......03/24/2017
--- Cloud error message: Runtime was not set up for cloud file......03/23/2017
--- Refresh design table with server metadata......02/22/2017
--- Change resolution of exported images......02/08/2017
--- OncoLand Case Study - Cox Model......02/06/2017
--- Decryptcloud......01/20/2017
--- Refresh Land......11/21/2016
--- Gene sets curated by OmicSoft from Land......11/10/2016
--- Plot Per-Gene Expression in a Sample to Compare GeneSets......10/27/2016
--- Steps to build AWS ArrayServer with cloud plugin......10/20/2016
--- Libgdiplus complie error......10/18/2016
--- Open ArrayStudioLauncher with a link to content......10/18/2016
--- Error Instance creation is not successful......10/13/2016
--- Mask heatmap rows or columns......09/27/2016
--- InstanceType......09/21/2016
--- How to highlight selected genes in a scatter plot in Array Studio......09/01/2016
--- Annotate Variants in Array Studio......08/31/2016
--- Cloud error message: Not sufficient capacity in cloud......08/30/2016
--- Filter for significant genes from multiple tests......07/29/2016
--- How to compile Alignment Report from bam.summary.txt file......07/28/2016
--- GCF......07/21/2016
--- Ftp connection can not be established between server and client after trying 100 rounds of multi-threaded ftp......07/21/2016
--- Recover From Analysis With Error......07/20/2016
--- Build AWS RedHat AMI for OmicSoft Cloud Computing......06/16/2016
--- OmicSoft BoxPlot......06/06/2016
--- Align Ion Torrent reads......06/01/2016
--- Genome Browser Sequence Legend......05/17/2016
--- OncoLand Case Study - Summarize Mutation Count......05/13/2016
--- OncoLand Case Study - Co-mutated Genes......05/13/2016
--- OncoLand Case Study - SampleSets with Grouping......05/13/2016
--- OncoLand Case Study - Clinical Variables......05/13/2016
--- OncoLand Case Study - Custom Query......05/13/2016
--- OncoLand Case Studies......05/13/2016
--- How to resolve HRESULT 0x8007000B Error......05/11/2016
--- Build AWS Ubuntu AMI for OmicSoft Cloud Computing......04/13/2016
--- Import Expression Data......04/01/2016
--- GSEA could not find buckets file......03/07/2016
--- Omicsoft GenCode Gene Model......03/03/2016
--- How to make survival plots for customized sample categories......08/06/2015
--- SimulateQueue......07/17/2015
--- How to make survival plots for sample categories defined by expression and/or mutations in OncoLand......06/24/2015
--- CloudVolumeTag......06/01/2015
--- Find a list of genes showing differential expression between two groups of samples......05/13/2015
--- CloudInstanceTag......04/14/2015
--- Why the .osreg files I put in Instruction folder are not processed?......04/10/2015
--- Example of running 100 CCLE samples on cloud......04/10/2015
--- What is the relationship between sampleset and project?......03/05/2015
--- SubnetID......02/23/2015
--- CloudMaxInstanceCountPerJob......02/23/2015
--- CloudMaxInstanceCount......02/23/2015
--- Trim UTRs by data in RNA-Seq Analysis......12/17/2014
--- Naive Count For miRNA......12/04/2014
--- What is Fold Change......12/01/2014
--- OmicSoft Aligner Version 4 (OSA4) Benchmark......12/01/2014
--- How can I connect data points from the same sample by lines in views?......11/19/2014
--- How to check the installation and enable .NET 3.5 in Windows......11/04/2014
--- Charting error in Oshell or ArrayServer run......11/03/2014
--- Amazon function list required to run Omicsoft On Cloud......10/21/2014
--- Getting downloading error when analyzing microarray data......10/17/2014
--- ArrayStudio ClickOnce Launch in Mac......10/09/2014
--- MiRNA alignment and quantification......10/08/2014
--- How can I merge multiple projects into a single project in Array Studio?......10/07/2014
--- InstanceProfileArn......09/25/2014
--- Check List for ArrayServer Migration......09/23/2014
--- Manage Cloud Instances......09/08/2014
--- Manage Cloud Files......09/08/2014
--- InstanceProfileRole......09/08/2014
--- Quantification in Strand Specific RNA-Seq dataset......09/03/2014
--- Modify ArrayStudio ClickOnce Launch Link in Mac......08/26/2014
--- TPM and FPKM......08/21/2014
--- ArrayServer Configuration with Cloud......08/13/2014
--- Different quality encoding......07/30/2014
--- Alternative splicing detection......07/09/2014
--- Ftpupload......06/11/2014
--- Restore Fastq Files From BAM......06/06/2014
--- Bas and BAM files......06/05/2014
--- Genome Browser Share Options......06/05/2014
--- Heatmap normalization......05/29/2014
--- Error for hash HashValidation......05/20/2014
--- NGS Copy Number Analysis Using OmicSoft......05/20/2014
--- Generate copy number baseline for NGS data......05/06/2014
--- Master Server and Analytic Server......04/30/2014
--- ArrayServer cannot get real time job log when running on the cluster......03/20/2014
--- Agilent CGH QC Metric......03/04/2014
--- Common ArrayServer Issues......02/26/2014
--- When shall RNA-Seq quantification results be transformed/normalized?......02/21/2014
--- How do I find out what parameters were used for a particular workflow or used to generate a dataset or table?......02/12/2014
--- How to install .NET 3.5 on Windows Server......01/21/2014
--- GeneBas.GenomeBrowser......12/16/2013
--- How is pair information used in RNA-Seq alignment......12/13/2013
--- How is the quality score used in alignment?......12/13/2013
--- How is gene model used in RNA-Seq alignment......12/13/2013
--- How to save filters and filtered data......12/12/2013
--- Check multi-read mapping......12/11/2013
--- Example .proxy file......12/03/2013
--- Why I cannot zoom heatmap?......11/05/2013
--- Order of samples and variables in hierarchical clustering......11/04/2013
--- Example of seeting cluster parallel environment......10/05/2013
--- Error=Too many open files......09/17/2013
--- Understand Filter Ngs Files reports......09/06/2013
--- Maximum number of novel exon junctions......08/30/2013
--- Include duplicate reads in DNA-Seq data......08/28/2013
--- Typical way to update/restart ArrayServer......08/09/2013
--- Omicsoft Gene Model......07/25/2013
--- Setting up ulimit for ArrayServer......07/16/2013
--- Autofill web service......07/14/2013
--- Error during fastq-dump step in downloadSRA job......07/12/2013
--- Setting Proxy For Omicsoft ArrayServer......07/10/2013
--- Which algorithm / parameters are used in searching illumina adaptors sequences?......07/08/2013
--- What is the benefit of using the Sample Management System in Array Studio?......07/08/2013
--- Does Array Studio have a workflow for paired-end strand-specific RNA-seq?......07/08/2013
--- I am getting the error "Application cannot be started" when I try to launch the webstart application......07/03/2013
--- Publish local project with NGS data......07/02/2013
--- What does dot mean in variation report......06/28/2013
--- What is the difference between Mutations and Somatic mutations Analysis?......06/28/2013
--- Save Project After Each Important Step During Analysis......06/27/2013
--- How to use multiple sequence files for one sample?......06/26/2013
--- Tips In Setting Up Oshell......06/26/2013
--- Paired-end reads filtering......06/21/2013
--- "Could not find file" error......06/20/2013
--- Merge fusion report of individual runs or samples......06/19/2013
--- Interpret and visualize fusion report......06/19/2013
--- Output all entries for a specific field......06/12/2013
--- Grey zone in dendrogram (heatmap) after filtering......06/12/2013
--- Difference between Summarize Mutation Data and Summarize VCF Data (SAMTools)......06/12/2013
--- Multiple panels/views in Genome Browser......06/11/2013
--- How to make RNA-Seq gene ID recognized by MicroArray modules......06/11/2013
--- Run jobs in local when you are in server project......06/07/2013
--- Why count data are not integers from OmicSoft quantification......06/04/2013
--- ODP setup for Windows ArrayServer using Oracle Database......06/03/2013
--- Difference between "Map Reads to Genome (Illumina)" and "Map read to Genome (long reads)"......05/30/2013
--- Why do I see zero effective alignment counts after adding aligned BAM files......05/24/2013
--- How can I analyze NGS data on a list of customized region only......05/23/2013
--- How can we avoid auto-updates that occur upon starting up ArrayStudio......05/20/2013
--- Which columns will be indexed as ID for autofill in ArrayServer Search......05/14/2013
--- CNV data preprocessing for Affymetrix SNP Array......05/10/2013
--- Array Viewer Links......05/08/2013
--- Sharing project(s) using ArrayServer and ArrayViewer......05/08/2013
--- Fusion strand and strands of fusion partners......05/07/2013
--- Get out of memory error......04/29/2013
--- Omicsoft RPKM/FPKM/Count values......04/26/2013
--- Compute copy number log2ratio values from Affymetrix SNP arrays......04/25/2013
--- User GenomeMark to bookmark regions in genome browser......04/23/2013
--- Common ArrayStudio Launching Issues......04/19/2013
--- Revoke/unpublish a project from ArrayServer......04/16/2013
--- Isoform expression profile view in genome browser......04/10/2013
--- Factors that affect alignment time......04/05/2013
--- Errors related to bugs in Microsoft .Net framework 2.0......04/05/2013
--- Reorder variables or observations in Microarray data......04/04/2013
--- Convert inference report to MicroArray data......04/03/2013
--- View alignments and reads in genome browser......04/03/2013
--- DESeq vs DESeq R Package......03/28/2013
--- How to export annotated mutation report in batch mode?......03/28/2013
--- Which columns will be indexed as masterid for search in ArrayServer......03/27/2013
--- Setup ArrayServer in Cluster......03/19/2013
--- Alignment and read counts......03/14/2013
--- Logic to determine paired-end read files and sample name......02/12/2013
--- Genome browser alignment filters......01/17/2013
--- Master and Analytic Servers......09/11/2012
--- View Multiple Gene Regions......09/07/2012
--- Track Properties......09/06/2012
--- Is Estimate the same as a fold change? If not, what is a Fold Change?......08/10/2012
--- Visualization of RNA-Seq Aligned Data......07/17/2012
--- AddColumns.pdf......07/13/2012
--- Raw Data QC of RNA-Seq Data......06/29/2012
--- Aligned Data QC for RNA-Seq......06/27/2012
--- BAM......05/02/2012
--- MultiplicityAdjustment......04/11/2012
--- Search Read Name in Genome Browser......02/23/2012
--- Getting started with Array Studio......02/23/2012
--- Hardware / Software requirements for Array Server......02/23/2012
--- User Guides for Array Studio or Array Server......02/23/2012
--- Installation Requirements For Array Studio......02/23/2012


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