GnomAD

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This annotation provides allele frequencies and counts from gnomAD:

  • gnomAD_AlleleFrequency cross-population frequency of the Alternative allele
  • gnomAD_AlleleCount cross-population count of Alternative allele
  • gnomAD_HomAltCount cross-population count of individuals homozygous for the Alternative allele
  • gnomAD_POP.AlleleFrequency frequency of the Alternative allele within population POP
  • gnomAD_POP.AlleleCount count of the Alternative allele within population POP
  • gnomAD_POP.HomAltCount count of individuals homozygous for the Alternative allele within population POP
    • Populations:
      • AFR African/African-American
      • AMR Latino/Admixed American
      • ASJ Ashkenazi Jewish
      • EAS East Asian
      • FIN Finnish
      • NFE Non-Finnish European
      • OTH Other (population not assigned)
      • SAS South Asian

GnomAD.png

The current classifier version (for specifying in Land.cfg) is gnomAD_20170501 which was built from release 2.02