GeneSet.VcfSnp.CodingMatrix

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Coding Matrix

CodingMatrix.jpg

Contents


Overview

This view is a matrix of samples as rows and carrier status by gene as columns with sample attributes appended

This View is available in the multi-gene search context, in the Sequenced section in Select View:

CodingMatrixSelect.jpg

Data/Metadata Requirements

This view is a pivot of the Carrier Sample Details view with the same gnomAD based frequency filter to limit to rare variants

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Implicit pre-processing

The same pre-processing as applied in the Carrier Sample Details view is also applied here. The AAMutation value from that view is then collapsed by sample and gene with multiple AAMutation values being reported in a CompositeFactor column for each gene.

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