DnaSeqQCMetrics

From Array Suite Wiki

Jump to: navigation, search


Begin DnaSeqQCMetrics /Namespace=NgsLib /RunOnServer=False;
Project NameOfProject;
Data NameOfProject\\NameOfNGSDataset;
GeneModel (none);
Metrics Alignment,Flag,InsertSize,Duplication,Strand,GenomeCoverage;
Options /ParallelJobNumber=8 /ExcludeFailedAlignments=True /ExcludeDuplicates=True /ExcludeSecondaryAlignments=True /ExcludeMultiReads=False
/ExcludeSingletons=False /OutputFolder="";
Output ;
End;

Related Articles

DNA-Seq QC Metrics GUI