ClusterGridEngine

From Array Suite Wiki

Jump to: navigation, search

ArrayServer.cfg configuration in Option Section

Default value = SGE

Set this to the type of grid engine. Acceptable values are:

  1. SGE
  2. PBS
  3. LSF
  4. LSF2: same as LSF but use KB as memory unit (LSF usually assumes MB)
  5. SGE2: same as SGE but not using qacct to check job status
  6. SGE3: same as SGE but cluster skip writing mem_free
  7. SGE4: same as SGE but not using qacct to check job status; also add line "#$ -S /bin/bash" in qsub script to force the shell to use bash.